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61.
Zui Fujimoto Hitomi Ichinose Tomoko Maehara Mariko Honda Motomitsu Kitaoka Satoshi Kaneko 《The Journal of biological chemistry》2010,285(44):34134-34143
Exo-1,5-α-l-arabinofuranosidases belonging to glycoside hydrolase family 43 have strict substrate specificity. These enzymes hydrolyze only the α-1,5-linkages of linear arabinan and arabino-oligosaccharides in an exo-acting manner. The enzyme from Streptomyces avermitilis contains a core catalytic domain belonging to glycoside hydrolase family 43 and a C-terminal arabinan binding module belonging to carbohydrate binding module family 42. We determined the crystal structure of intact exo-1,5-α-l-arabinofuranosidase. The catalytic module is composed of a 5-bladed β-propeller topologically identical to the other family 43 enzymes. The arabinan binding module had three similar subdomains assembled against one another around a pseudo-3-fold axis, forming a β-trefoil-fold. A sugar complex structure with α-1,5-l-arabinofuranotriose revealed three subsites in the catalytic domain, and a sugar complex structure with α-l-arabinofuranosyl azide revealed three arabinose-binding sites in the carbohydrate binding module. A mutagenesis study revealed that substrate specificity was regulated by residues Asn-159, Tyr-192, and Leu-289 located at the aglycon side of the substrate-binding pocket. The exo-acting manner of the enzyme was attributed to the strict pocket structure of subsite −1, formed by the flexible loop region Tyr-281–Arg-294 and the side chain of Tyr-40, which occupied the positions corresponding to the catalytic glycon cleft of GH43 endo-acting enzymes. 相似文献
62.
A novel selenium-containing compound having a selenium atom in the imidazole
ring,
2-selenyl-Nα,Nα,Nα-trimethyl-l-histidine,
3-(2-hydroseleno-1H-imidazol-5-yl)-2-(trimethylammonio)propanoate,
was identified from the blood and other tissues of the bluefin tuna,
Thunnus orientalis. The selenium-containing compound was
purified from the tuna blood in several chromatographic steps. High resolution
mass spectrometry and nuclear magnetic resonance spectroscopy showed that the
exact mass of the [M+H]+
ion of the compound was 533.0562 and the molecular formula was
C18H29N6O4Se2. Its
gross structure was assigned as the oxidized dimeric form of an ergothioneine
selenium analog in which the sulfur of ergothioneine is replaced by selenium.
Therefore, we named this novel selenium-containing compound
“selenoneine.” By speciation analysis of organic selenium
compounds using liquid chromatography inductively coupled plasma mass
spectrometry, selenoneine was found widely distributed in various tissues of the
tuna, with the highest concentration in blood; mackerel blood contained similar
levels. Selenoneine was measurable at 2–4 orders of magnitude lower
concentration in a limited set of tissues from squid, tilapia, pig, and chicken.
Quantitatively, selenoneine is the predominant form of organic selenium in tuna
tissues. 相似文献
63.
Mukai T Maeda Y Tamura T Matsuoka M Tsukamoto Y Makino M 《Journal of immunology (Baltimore, Md. : 1950)》2010,185(10):6234-6243
To activate naive T cells convincingly using Mycobacterium bovis bacillus Calmette-Guérin (BCG), recombinant BCG (BCG-D70M) that was deficient in urease, expressed with gene encoding the fusion of BCG-derived heat shock protein (HSP) 70 and Mycobacterium leprae-derived major membrane protein (MMP)-II, one of the immunodominant Ags of M. leprae, was newly constructed. BCG-D70M was more potent in activation of both CD4(+) and CD8(+) subsets of naive T cells than recombinant BCGs including urease-deficient BCG and BCG-70M secreting HSP70-MMP-II fusion protein. BCG-D70M efficiently activated dendritic cells (DCs) to induce cytokine production and phenotypic changes and activated CD4(+) T cells even when macrophages were used as APCs. The activation of both subsets of T cells was MHC and CD86 dependent. Pretreatment of DCs with chloroquine inhibited both surface expression of MMP-II on DCs and the activation of T cells by BCG-D70M-infected APCs. The naive CD8(+) T cell activation was inhibited by treatment of DCs with brefeldin A and lactacystin so that the T cell was activated by TAP- and proteosome-dependent cytosolic cross-priming pathway. From naive CD8(+) T cells, effector T cells producing perforin and memory T cells having migration markers were produced by BCG-D70M stimulation. BCG-D70M primary infection in C57BL/6 mice produced T cells responsive to in vitro secondary stimulation with MMP-II and HSP70 and more efficiently inhibited the multiplication of subsequently challenged M. leprae than vector control BCG. These results indicate that the triple combination of HSP70, MMP-II, and urease depletion may provide a useful tool for inducing better activation of naive T cells. 相似文献
64.
Atomic force microscope techniques and multi-staining fluorescence microscopy were employed to study the steps in drinking water biofilm formation. During the formation of a conditioning layer, surface hydrophobic forces increased and the range of characteristic hydrophobic forces diversified with time, becoming progressively complex in macromolecular composition, which in return triggered irreversible cellular adhesion. AFM visualization of 1 to 8 week drinking water biofilms showed a spatially discontinuous and heterogeneous distribution comprising an extensive network of filamentous fungi in which biofilm aggregates were embedded. The elastic modulus of 40-day-old biofilms ranged from 200 to 9000?kPa, and the biofilm deposits with a height >0.5 μm had an elastic modulus <600?kPa, suggesting that the drinking water biofilms were composed of a soft top layer and a basal layer with significantly higher elastic modulus values falling in the range of fungal elasticity. 相似文献
65.
66.
Fukada S Yamaguchi M Kokubo H Ogawa R Uezumi A Yoneda T Matev MM Motohashi N Ito T Zolkiewska A Johnson RL Saga Y Miyagoe-Suzuki Y Tsujikawa K Takeda S Yamamoto H 《Development (Cambridge, England)》2011,138(21):4609-4619
Satellite cells, which are skeletal muscle stem cells, divide to provide new myonuclei to growing muscle fibers during postnatal development, and then are maintained in an undifferentiated quiescent state in adult skeletal muscle. This state is considered to be essential for the maintenance of satellite cells, but their molecular regulation is unknown. We show that Hesr1 (Hey1) and Hesr3 (Heyl) (which are known Notch target genes) are expressed simultaneously in skeletal muscle only in satellite cells. In Hesr1 and Hesr3 single-knockout mice, no obvious abnormalities of satellite cells or muscle regenerative potentials are observed. However, the generation of undifferentiated quiescent satellite cells is impaired during postnatal development in Hesr1/3 double-knockout mice. As a result, myogenic (MyoD and myogenin) and proliferative (Ki67) proteins are expressed in adult satellite cells. Consistent with the in vivo results, Hesr1/3-null myoblasts generate very few Pax7(+) MyoD(-) undifferentiated cells in vitro. Furthermore, the satellite cell number gradually decreases in Hesr1/3 double-knockout mice even after it has stabilized in control mice, and an age-dependent regeneration defect is observed. In vivo results suggest that premature differentiation, but not cell death, is the reason for the reduced number of satellite cells in Hesr1/3 double-knockout mice. These results indicate that Hesr1 and Hesr3 are essential for the generation of adult satellite cells and for the maintenance of skeletal muscle homeostasis. 相似文献
67.
68.
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70.
Yumiko Ishikawa Kazuyuki Kobayashi Masatsugu Yamamoto Kyosuke Nakata Tetsuya Takagawa Yasuhiro Funada Yoshikazu Kotani Hajime Karasuyama Masaru Yoshida Yoshihiro Nishimura 《Respiratory research》2011,12(1):42